@vsliouniaev tried practically everything: upgraded EKS cluster to 1.14. Messed with instance type settings as recommended in kubernetes/kubernetes#49926.
The only other possibly related issue was reported under kubernetes/kubernetes#67014 (comment) which involved changing securityContext settings.
None of these worked for me. Ended up installing Prometheus via the stable/prometheus chart and then used stable/prometheus-operator for other bits.
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